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Select item 105577701.

TgLaforin, a glucan phosphatase, reveals the dynamic role of storage polysaccharides in Toxoplasma gondii tachyzoites and bradyzoites

Robert D. Murphy, Cortni A. Troublefield, Joy S. Miracle, Lyndsay E.A. Young, Aashutosh Tripathi, Corey O. Brizzee, Animesh Dhara, Abhijit Patwardhan, Ramon C. Sun, Craig W. Vander Kooi, Matthew S. Gentry, Anthony P. Sinai

Version 3. bioRxiv. Preprint. 2023 Sep 29 [revised 2024 Nov 8]. doi: 10.1101/2023.09.29.560185

PMCID:: PMC10557770

Article PDF–4.1M

Select item 108887702.

Overcoming the “feast or famine” effect: improved interaction testing in genome-wide association studies

Huanlin Zhou, Mary Sara McPeek

Version 2. bioRxiv. Preprint. 2024 Feb 15 [revised 2024 Oct 26]. doi: 10.1101/2024.02.13.580168

PMCID:: PMC10888770

Article PDF–2.1M

Select item 108712493.

Hill-Robertson interference may bias the inference of fitness effects of new mutations in highly selfing species

Austin Daigle, Parul Johri

Version 3. bioRxiv. Preprint. 2024 Feb 8 [revised 2024 Sep 23]. doi: 10.1101/2024.02.06.579142

Published in:: Evolution. 2024 Nov 20

PMCID:: PMC10871249

Article PDF–7.6M

Select item 106349834.

Principles of Computation by Competitive Protein Dimerization Networks

Jacob Parres-Gold, Matthew Levine, Benjamin Emert, Andrew Stuart, Michael B. Elowitz

Version 2. bioRxiv. Preprint. 2023 Nov 2 [revised 2024 Sep 15]. doi: 10.1101/2023.10.30.564854

PMCID:: PMC10634983

Article PDF–9.0M

Select item 108711925.

TMEM16 and OSCA/TMEM63 proteins share a conserved potential to permeate ions and phospholipids

Augustus J. Lowry, Pengfei Liang, Mo Song, Y.C. Serena Wan, Zhen-Ming Pei, Huanghe Yang, Yang Zhang

Version 2. bioRxiv. Preprint. 2024 Feb 5 [revised 2024 Sep 3]. doi: 10.1101/2024.02.04.578431

Published in:: eLife. 2024; 13: RP96957.

PMCID:: PMC10871192

Article PDF–4.3M

Select item 109252856.

Disordered proteins interact with the chemical environment to tune their protective function during drying

Shraddha KC, Kenny H Nguyen, Vincent Nicholson, Annie Walgren, Tony Trent, Edith Gollub, Sofia Ramero, Alex S Holehouse, Shahar Sukenik, Thomas C Boothby

Version 2. bioRxiv. Preprint. 2024 Mar 1 [revised 2024 Aug 1]. doi: 10.1101/2024.02.28.582506

Published in:: eLife. 2024; 13: RP97231.

PMCID:: PMC10925285

PDF–5.5M

Select item 101977007.

Influence of expression and purification protocols on Gα biochemical activity: kinetics of plant and mammalian G protein cycles

Timothy E. Gookin, David Chakravorty, Sarah M. Assmann

Version 4. bioRxiv. Preprint. 2023 May 10 [revised 2024 Jun 16]. doi: 10.1101/2023.05.10.540258

PMCID:: PMC10197700

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Select item 104911958.

Genetic code expansion, click chemistry, and light-activated PI3K reveal details of membrane protein trafficking downstream of receptor tyrosine kinases

Duk-Su Koh, Anastasiia Stratiievska, Subhashis Jana, Shauna C. Otto, Teresa M. Swanson, Anthony Nhim, Sara Carlson, Marium Raza, Lígia Araujo Naves, Eric N. Senning, Ryan A. Mehl, Sharona E. Gordon

Version 4. bioRxiv. Preprint. 2023 Aug 30 [revised 2024 Jun 10]. doi: 10.1101/2023.08.29.555449

Published in:: eLife. 2024; 12: RP91012.

PMCID:: PMC10491195

Article PDF–12M

Select item 104736429.

Ubiquitin-driven protein condensation initiates clathrin-mediated endocytosis

Feng Yuan, Sadhana Gollapudi, Kasey Day, Grant Ashby, Arjun Sangani, Brandon Malady, Liping Wang, Eileen M Lafer, Jon Huibregtse, Jeanne Stachowiak

Version 2. bioRxiv. Preprint. 2023 Aug 22 [revised 2024 May 19]. doi: 10.1101/2023.08.21.554139

Published in:: PNAS Nexus. 2024 Sep; 3(9): pgae342.

PMCID:: PMC10473642

Article

Select item 1109117910.

Soil microbiota and herbivory drive the assembly of tomato plant-associated microbial communities through different mechanisms

Antonino Malacrinò, Alison E. Bennett

Commun Biol. 2024; 7: 564. Published online 2024 May 13. doi: 10.1038/s42003-024-06259-6

PMCID:: PMC11091179

Article PDF–2.7M

Select item 1108978711.

Genome-wide expression analysis of LACS gene family implies GhLACS25 functional responding to salt stress in cotton

Yuchen Xu, Shouyang Fu, Yiwen Huang, Dayun Zhou, Yuzhen Wu, Jun Peng, Meng Kuang

BMC Plant Biol. 2024; 24: 392. Published online 2024 May 13. doi: 10.1186/s12870-024-05045-0

PMCID:: PMC11089787

Article PDF–5.6M

Select item 1108870412.

Structural basis for the regulation of plant transcription factor WRKY33 by the VQ protein SIB1

Xu Dong, Lulu Yu, Qiang Zhang, Ju Yang, Zhou Gong, Xiaogang Niu, Hongwei Li, Xu Zhang, Maili Liu, Changwen Jin, Yunfei Hu

Commun Biol. 2024; 7: 561. Published online 2024 May 11. doi: 10.1038/s42003-024-06258-7

PMCID:: PMC11088704

Article PDF–2.5M

Select item 1108870013.

Sweet corn association panel and genome-wide association analysis reveal loci for chilling-tolerant germination

Zhenxing Wu, Tingzhen Wang, Jianjian Chen, Yun Zhang, Guihua Lv

Sci Rep. 2024; 14: 10791. Published online 2024 May 11. doi: 10.1038/s41598-024-61797-7

PMCID:: PMC11088700

Article PDF–4.8M

Select item 1108869614.

An integrated multi-omics approach reveals polymethoxylated flavonoid biosynthesis in Citrus reticulata cv. Chachiensis

Jiawen Wen, Yayu Wang, Xu Lu, Huimin Pan, Dian Jin, Jialing Wen, Canzhi Jin, Sunil Kumar Sahu, Jianmu Su, Xinyue Luo, Xiaohuan Jin, Jiao Zhao, Hong Wu, E-Hu Liu, Huan Liu

Nat Commun. 2024; 15: 3991. Published online 2024 May 11. doi: 10.1038/s41467-024-48235-y

PMCID:: PMC11088696

Article PDF–3.2M

Select item 1108813315.

The MYB family and their response to abiotic stress in ginger (Zingiber officinale Roscoe)

Hai-Tao Xing, Jia-Yu Shi, Shi-Qing Yin, Qing-Hong Wu, Jian-Ling Lv, Hong-Lei Li

BMC Genomics. 2024; 25: 460. Published online 2024 May 11. doi: 10.1186/s12864-024-10392-1

PMCID:: PMC11088133

Article PDF–5.9M

Select item 1108758516.

Unveiling the A-to-I mRNA editing machinery and its regulation and evolution in fungi

Chanjing Feng, Kaiyun Xin, Yanfei Du, Jingwen Zou, Xiaoxing Xing, Qi Xiu, Yijie Zhang, Rui Zhang, Weiwei Huang, Qinhu Wang, Cong Jiang, Xiaojie Wang, Zhensheng Kang, Jin-Rong Xu, Huiquan Liu

Nat Commun. 2024; 15: 3934. Published online 2024 May 10. doi: 10.1038/s41467-024-48336-8

PMCID:: PMC11087585

Article PDF–5.0M

Select item 1108735017.

Novel PHOTOPERIOD-1 gene variants associate with yield-related and root-angle traits in European bread wheat

Manar Makhoul, Rica-Hanna Schlichtermann, Samson Ugwuanyi, Sven E. Weber, Kai P. Voss-Fels, Andreas Stahl, Holger Zetzsche, Benjamin Wittkop, Rod J. Snowdon, Christian Obermeier

Theor Appl Genet. 2024; 137(6): 125. Published online 2024 May 10. doi: 10.1007/s00122-024-04634-9

PMCID:: PMC11087350

Article PDF–2.8M

Select item 1107904918.

Carotenoid biosynthesis genes LcLCYB, LcLCYE, and LcBCH from wolfberry confer increased carotenoid content and improved salt tolerance in tobacco

Chen Li, Caili Wang, Zhiyang Cheng, Yu Li, Wenjing Li

Sci Rep. 2024; 14: 10586. Published online 2024 May 8. doi: 10.1038/s41598-024-60848-3

PMCID:: PMC11079049

Article PDF–11M

Select item 1107902319.

A quantitative gibberellin signaling biosensor reveals a role for gibberellins in internode specification at the shoot apical meristem

Bihai Shi, Amelia Felipo-Benavent, Guillaume Cerutti, Carlos Galvan-Ampudia, Lucas Jilli, Geraldine Brunoud, Jérome Mutterer, Elody Vallet, Lali Sakvarelidze-Achard, Jean-Michel Davière, Alejandro Navarro-Galiano, Ankit Walia, Shani Lazary, Jonathan Legrand, Roy Weinstain, Alexander M. Jones, Salomé Prat, Patrick Achard, Teva Vernoux

Nat Commun. 2024; 15: 3895. Published online 2024 May 8. doi: 10.1038/s41467-024-48116-4